Gene : evm_27.TU.AmTr_v1.0_scaffold00069.115 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23138:SF97 - NUCLEAR PORE COMPLEX PROTEIN NUP50 Genomic Order:  114
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00069.115 Secondary Identifier:  ? PAC:31558213
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00069.115 0.5kb upstream 0.5kb upstream 7653 true AmTr_v1.0_scaffold00069: 2188355-2196007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00069: 2188355-2188854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 0.5kb downstream 0.5kb downstream 7653 true AmTr_v1.0_scaffold00069: 2188855-2196507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00069: 2196008-2196507 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 1.0kb upstream 1.0kb upstream 8153 true AmTr_v1.0_scaffold00069: 2187855-2196007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00069: 2187855-2188854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 1.0kb downstream 1.0kb downstream 8153 true AmTr_v1.0_scaffold00069: 2188855-2197007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00069: 2196008-2197007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 2.0kb upstream 2.0kb upstream 9153 true AmTr_v1.0_scaffold00069: 2186855-2196007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00069: 2186855-2188854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 2.0kb downstream 2.0kb downstream 9153 true AmTr_v1.0_scaffold00069: 2188855-2198007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00069: 2196008-2198007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 5.0kb upstream 5.0kb upstream 12153 true AmTr_v1.0_scaffold00069: 2183855-2196007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00069: 2183855-2188854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 5.0kb downstream 5.0kb downstream 12153 true AmTr_v1.0_scaffold00069: 2188855-2201007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00069: 2196008-2201007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 10.0kb upstream 10.0kb upstream 17153 true AmTr_v1.0_scaffold00069: 2178855-2196007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00069: 2178855-2188854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 10.0kb downstream 10.0kb downstream 17153 true AmTr_v1.0_scaffold00069: 2188855-2206007 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.115 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00069: 2196008-2206007 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048629 5273 Angiosperm View MSA
121344794 5274 Embryophyte View MSA
123425860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain