Gene : evm_27.TU.AmTr_v1.0_scaffold00067.198 A. trichopoda v1.0
Defline:  (1 of 1) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  195
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00067.198 Secondary Identifier:  ? PAC:31561466
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-4942 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00067.198 0.5kb upstream 0.5kb upstream 24103 true AmTr_v1.0_scaffold00067: 3198366-3222468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00067: 3221969-3222468 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 0.5kb downstream 0.5kb downstream 24103 true AmTr_v1.0_scaffold00067: 3197866-3221968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00067: 3197866-3198365 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 1.0kb upstream 1.0kb upstream 24603 true AmTr_v1.0_scaffold00067: 3198366-3222968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00067: 3221969-3222968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 1.0kb downstream 1.0kb downstream 24603 true AmTr_v1.0_scaffold00067: 3197366-3221968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00067: 3197366-3198365 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 2.0kb upstream 2.0kb upstream 25603 true AmTr_v1.0_scaffold00067: 3198366-3223968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00067: 3221969-3223968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 2.0kb downstream 2.0kb downstream 25603 true AmTr_v1.0_scaffold00067: 3196366-3221968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00067: 3196366-3198365 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 5.0kb upstream 5.0kb upstream 28603 true AmTr_v1.0_scaffold00067: 3198366-3226968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00067: 3221969-3226968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 5.0kb downstream 5.0kb downstream 28603 true AmTr_v1.0_scaffold00067: 3193366-3221968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00067: 3193366-3198365 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 10.0kb upstream 10.0kb upstream 33603 true AmTr_v1.0_scaffold00067: 3198366-3231968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00067: 3221969-3231968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 10.0kb downstream 10.0kb downstream 33603 true AmTr_v1.0_scaffold00067: 3188366-3221968 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.198 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00067: 3188366-3198365 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain