Gene : evm_27.TU.AmTr_v1.0_scaffold00067.112 A. trichopoda v1.0
Defline:  (1 of 1) PF01535//PF13041//PF15704 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Mitochondrial ATP synthase subunit (Mt_ATP_synt) Genomic Order:  110
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00067.112 Secondary Identifier:  ? PAC:31561509
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00067.112 0.5kb upstream 0.5kb upstream 23271 true AmTr_v1.0_scaffold00067: 1788334-1811604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00067: 1788334-1788833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 0.5kb downstream 0.5kb downstream 23271 true AmTr_v1.0_scaffold00067: 1788834-1812104 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00067: 1811605-1812104 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 1.0kb upstream 1.0kb upstream 23771 true AmTr_v1.0_scaffold00067: 1787834-1811604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00067: 1787834-1788833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 1.0kb downstream 1.0kb downstream 23771 true AmTr_v1.0_scaffold00067: 1788834-1812604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00067: 1811605-1812604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 2.0kb upstream 2.0kb upstream 24771 true AmTr_v1.0_scaffold00067: 1786834-1811604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00067: 1786834-1788833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 2.0kb downstream 2.0kb downstream 24771 true AmTr_v1.0_scaffold00067: 1788834-1813604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00067: 1811605-1813604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 5.0kb upstream 5.0kb upstream 27771 true AmTr_v1.0_scaffold00067: 1783834-1811604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00067: 1783834-1788833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 5.0kb downstream 5.0kb downstream 27771 true AmTr_v1.0_scaffold00067: 1788834-1816604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00067: 1811605-1816604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 10.0kb upstream 10.0kb upstream 32771 true AmTr_v1.0_scaffold00067: 1778834-1811604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00067: 1778834-1788833 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 10.0kb downstream 10.0kb downstream 32771 true AmTr_v1.0_scaffold00067: 1788834-1821604 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00067.112 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00067: 1811605-1821604 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain