Gene : evm_27.TU.AmTr_v1.0_scaffold00071.203 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Genomic Order:  200
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.203 Secondary Identifier:  ? PAC:31561294
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.203 0.5kb upstream 0.5kb upstream 22301 true AmTr_v1.0_scaffold00071: 3440534-3462834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 3462335-3462834 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 0.5kb downstream 0.5kb downstream 22301 true AmTr_v1.0_scaffold00071: 3440034-3462334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 3440034-3440533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 1.0kb upstream 1.0kb upstream 22801 true AmTr_v1.0_scaffold00071: 3440534-3463334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 3462335-3463334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 1.0kb downstream 1.0kb downstream 22801 true AmTr_v1.0_scaffold00071: 3439534-3462334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 3439534-3440533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 2.0kb upstream 2.0kb upstream 23801 true AmTr_v1.0_scaffold00071: 3440534-3464334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 3462335-3464334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 2.0kb downstream 2.0kb downstream 23801 true AmTr_v1.0_scaffold00071: 3438534-3462334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 3438534-3440533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 5.0kb upstream 5.0kb upstream 26801 true AmTr_v1.0_scaffold00071: 3440534-3467334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 3462335-3467334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 5.0kb downstream 5.0kb downstream 26801 true AmTr_v1.0_scaffold00071: 3435534-3462334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 3435534-3440533 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 10.0kb upstream 10.0kb upstream 31801 true AmTr_v1.0_scaffold00071: 3440534-3472334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 3462335-3472334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 10.0kb downstream 10.0kb downstream 31801 true AmTr_v1.0_scaffold00071: 3430534-3462334 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.203 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 3430534-3440533 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain