Gene : evm_27.TU.AmTr_v1.0_scaffold00071.85 A. trichopoda v1.0
Defline:  (1 of 31) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  83
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.85 Secondary Identifier:  ? PAC:31561290
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.85 0.5kb upstream 0.5kb upstream 17263 true AmTr_v1.0_scaffold00071: 1396673-1413935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 1396673-1397172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 0.5kb downstream 0.5kb downstream 17263 true AmTr_v1.0_scaffold00071: 1397173-1414435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 1413936-1414435 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 1.0kb upstream 1.0kb upstream 17763 true AmTr_v1.0_scaffold00071: 1396173-1413935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 1396173-1397172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 1.0kb downstream 1.0kb downstream 17763 true AmTr_v1.0_scaffold00071: 1397173-1414935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 1413936-1414935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 2.0kb upstream 2.0kb upstream 18763 true AmTr_v1.0_scaffold00071: 1395173-1413935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 1395173-1397172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 2.0kb downstream 2.0kb downstream 18763 true AmTr_v1.0_scaffold00071: 1397173-1415935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 1413936-1415935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 5.0kb upstream 5.0kb upstream 21763 true AmTr_v1.0_scaffold00071: 1392173-1413935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 1392173-1397172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 5.0kb downstream 5.0kb downstream 21763 true AmTr_v1.0_scaffold00071: 1397173-1418935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 1413936-1418935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 10.0kb upstream 10.0kb upstream 26763 true AmTr_v1.0_scaffold00071: 1387173-1413935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 1387173-1397172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 10.0kb downstream 10.0kb downstream 26763 true AmTr_v1.0_scaffold00071: 1397173-1423935 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.85 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 1413936-1423935 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain