Gene : evm_27.TU.AmTr_v1.0_scaffold00071.42 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  41
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00071.42 Secondary Identifier:  ? PAC:31561317
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00071.42 0.5kb upstream 0.5kb upstream 18558 true AmTr_v1.0_scaffold00071: 770221-788778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00071: 770221-770720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 0.5kb downstream 0.5kb downstream 18558 true AmTr_v1.0_scaffold00071: 770721-789278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00071: 788779-789278 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 1.0kb upstream 1.0kb upstream 19058 true AmTr_v1.0_scaffold00071: 769721-788778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00071: 769721-770720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 1.0kb downstream 1.0kb downstream 19058 true AmTr_v1.0_scaffold00071: 770721-789778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00071: 788779-789778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 2.0kb upstream 2.0kb upstream 20058 true AmTr_v1.0_scaffold00071: 768721-788778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00071: 768721-770720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 2.0kb downstream 2.0kb downstream 20058 true AmTr_v1.0_scaffold00071: 770721-790778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00071: 788779-790778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 5.0kb upstream 5.0kb upstream 23058 true AmTr_v1.0_scaffold00071: 765721-788778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00071: 765721-770720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 5.0kb downstream 5.0kb downstream 23058 true AmTr_v1.0_scaffold00071: 770721-793778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00071: 788779-793778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 10.0kb upstream 10.0kb upstream 28058 true AmTr_v1.0_scaffold00071: 760721-788778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00071: 760721-770720 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 10.0kb downstream 10.0kb downstream 28058 true AmTr_v1.0_scaffold00071: 770721-798778 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00071.42 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00071: 788779-798778 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain