Gene : evm_27.TU.AmTr_v1.0_scaffold00069.66 A. trichopoda v1.0
Defline:  (1 of 1) PTHR14145:SF2 - COP9 SIGNALOSOME COMPLEX SUBUNIT 1 Genomic Order:  65
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00069.66 Secondary Identifier:  ? PAC:31558077
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00069.66 0.5kb upstream 0.5kb upstream 18083 true AmTr_v1.0_scaffold00069: 1279568-1297650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00069: 1297151-1297650 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 0.5kb downstream 0.5kb downstream 18083 true AmTr_v1.0_scaffold00069: 1279068-1297150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00069: 1279068-1279567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 1.0kb upstream 1.0kb upstream 18583 true AmTr_v1.0_scaffold00069: 1279568-1298150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00069: 1297151-1298150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 1.0kb downstream 1.0kb downstream 18583 true AmTr_v1.0_scaffold00069: 1278568-1297150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00069: 1278568-1279567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 2.0kb upstream 2.0kb upstream 19583 true AmTr_v1.0_scaffold00069: 1279568-1299150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00069: 1297151-1299150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 2.0kb downstream 2.0kb downstream 19583 true AmTr_v1.0_scaffold00069: 1277568-1297150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00069: 1277568-1279567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 5.0kb upstream 5.0kb upstream 22583 true AmTr_v1.0_scaffold00069: 1279568-1302150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00069: 1297151-1302150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 5.0kb downstream 5.0kb downstream 22583 true AmTr_v1.0_scaffold00069: 1274568-1297150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00069: 1274568-1279567 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 10.0kb upstream 10.0kb upstream 27583 true AmTr_v1.0_scaffold00069: 1279568-1307150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00069: 1297151-1307150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 10.0kb downstream 10.0kb downstream 27583 true AmTr_v1.0_scaffold00069: 1269568-1297150 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00069.66 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00069: 1269568-1279567 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047675 5273 Angiosperm View MSA
121344985 5274 Embryophyte View MSA
123424538 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain