Gene : evm_27.TU.AmTr_v1.0_scaffold00072.37 A. trichopoda v1.0
Defline:  (1 of 1) 1.10.9.1 - Plastoquinol--plastocyanin reductase / Cytochrome b6f complex Genomic Order:  37
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00072.37 Secondary Identifier:  ? PAC:31572573
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-101 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00072.37 0.5kb upstream 0.5kb upstream 4291 true AmTr_v1.0_scaffold00072: 967134-971424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00072: 967134-967633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 0.5kb downstream 0.5kb downstream 4291 true AmTr_v1.0_scaffold00072: 967634-971924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00072: 971425-971924 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 1.0kb upstream 1.0kb upstream 4791 true AmTr_v1.0_scaffold00072: 966634-971424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00072: 966634-967633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 1.0kb downstream 1.0kb downstream 4791 true AmTr_v1.0_scaffold00072: 967634-972424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00072: 971425-972424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 2.0kb upstream 2.0kb upstream 5791 true AmTr_v1.0_scaffold00072: 965634-971424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00072: 965634-967633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 2.0kb downstream 2.0kb downstream 5791 true AmTr_v1.0_scaffold00072: 967634-973424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00072: 971425-973424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 5.0kb upstream 5.0kb upstream 8791 true AmTr_v1.0_scaffold00072: 962634-971424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00072: 962634-967633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 5.0kb downstream 5.0kb downstream 8791 true AmTr_v1.0_scaffold00072: 967634-976424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00072: 971425-976424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 10.0kb upstream 10.0kb upstream 13791 true AmTr_v1.0_scaffold00072: 957634-971424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00072: 957634-967633 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 10.0kb downstream 10.0kb downstream 13791 true AmTr_v1.0_scaffold00072: 967634-981424 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.37 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00072: 971425-981424 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain