Gene : evm_27.TU.AmTr_v1.0_scaffold00072.87 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11406//PTHR11406:SF13 - PHOSPHOGLYCERATE KINASE Genomic Order:  87
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00072.87 Secondary Identifier:  ? PAC:31572623
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda CALVIN-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-1042 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00072.87 0.5kb upstream 0.5kb upstream 39001 true AmTr_v1.0_scaffold00072: 2249341-2288341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00072: 2287842-2288341 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 0.5kb downstream 0.5kb downstream 39001 true AmTr_v1.0_scaffold00072: 2248841-2287841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00072: 2248841-2249340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 1.0kb upstream 1.0kb upstream 39501 true AmTr_v1.0_scaffold00072: 2249341-2288841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00072: 2287842-2288841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 1.0kb downstream 1.0kb downstream 39501 true AmTr_v1.0_scaffold00072: 2248341-2287841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00072: 2248341-2249340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 2.0kb upstream 2.0kb upstream 40501 true AmTr_v1.0_scaffold00072: 2249341-2289841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00072: 2287842-2289841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 2.0kb downstream 2.0kb downstream 40501 true AmTr_v1.0_scaffold00072: 2247341-2287841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00072: 2247341-2249340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 5.0kb upstream 5.0kb upstream 43501 true AmTr_v1.0_scaffold00072: 2249341-2292841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00072: 2287842-2292841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 5.0kb downstream 5.0kb downstream 43501 true AmTr_v1.0_scaffold00072: 2244341-2287841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00072: 2244341-2249340 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 10.0kb upstream 10.0kb upstream 48501 true AmTr_v1.0_scaffold00072: 2249341-2297841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00072: 2287842-2297841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 10.0kb downstream 10.0kb downstream 48501 true AmTr_v1.0_scaffold00072: 2239341-2287841 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00072.87 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00072: 2239341-2249340 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048515 5273 Angiosperm View MSA
121310998 5274 Embryophyte View MSA
123425871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain