Gene : evm_27.TU.AmTr_v1.0_scaffold00080.12 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  12
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00080.12 Secondary Identifier:  ? PAC:31554498
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLUCOSE1PMETAB-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3881 Amborella trichopoda pathologic  
Atrichopoda PWY-882 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00080.12 0.5kb upstream 0.5kb upstream 15075 true AmTr_v1.0_scaffold00080: 413048-428122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00080: 413048-413547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 0.5kb downstream 0.5kb downstream 15075 true AmTr_v1.0_scaffold00080: 413548-428622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00080: 428123-428622 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 1.0kb upstream 1.0kb upstream 15575 true AmTr_v1.0_scaffold00080: 412548-428122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00080: 412548-413547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 1.0kb downstream 1.0kb downstream 15575 true AmTr_v1.0_scaffold00080: 413548-429122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00080: 428123-429122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 2.0kb upstream 2.0kb upstream 16575 true AmTr_v1.0_scaffold00080: 411548-428122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00080: 411548-413547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 2.0kb downstream 2.0kb downstream 16575 true AmTr_v1.0_scaffold00080: 413548-430122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00080: 428123-430122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 5.0kb upstream 5.0kb upstream 19575 true AmTr_v1.0_scaffold00080: 408548-428122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00080: 408548-413547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 5.0kb downstream 5.0kb downstream 19575 true AmTr_v1.0_scaffold00080: 413548-433122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00080: 428123-433122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 10.0kb upstream 10.0kb upstream 24575 true AmTr_v1.0_scaffold00080: 403548-428122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00080: 403548-413547 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 10.0kb downstream 10.0kb downstream 24575 true AmTr_v1.0_scaffold00080: 413548-438122 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00080.12 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00080: 428123-438122 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain