Gene : evm_27.TU.AmTr_v1.0_scaffold00079.106 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31846:SF10 - CHLOROPLASTIC GROUP IIA INTRON SPLICING FACILITATOR CRS1, CHLOROPLASTIC Genomic Order:  103
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00079.106 Secondary Identifier:  ? PAC:31564400
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00079.106 0.5kb upstream 0.5kb upstream 9920 true AmTr_v1.0_scaffold00079: 3189074-3198993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00079: 3189074-3189573 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 0.5kb downstream 0.5kb downstream 9920 true AmTr_v1.0_scaffold00079: 3189574-3199493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00079: 3198994-3199493 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 1.0kb upstream 1.0kb upstream 10420 true AmTr_v1.0_scaffold00079: 3188574-3198993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00079: 3188574-3189573 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 1.0kb downstream 1.0kb downstream 10420 true AmTr_v1.0_scaffold00079: 3189574-3199993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00079: 3198994-3199993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 2.0kb upstream 2.0kb upstream 11420 true AmTr_v1.0_scaffold00079: 3187574-3198993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00079: 3187574-3189573 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 2.0kb downstream 2.0kb downstream 11420 true AmTr_v1.0_scaffold00079: 3189574-3200993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00079: 3198994-3200993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 5.0kb upstream 5.0kb upstream 14420 true AmTr_v1.0_scaffold00079: 3184574-3198993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00079: 3184574-3189573 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 5.0kb downstream 5.0kb downstream 14420 true AmTr_v1.0_scaffold00079: 3189574-3203993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00079: 3198994-3203993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 10.0kb upstream 10.0kb upstream 19420 true AmTr_v1.0_scaffold00079: 3179574-3198993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00079: 3179574-3189573 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 10.0kb downstream 10.0kb downstream 19420 true AmTr_v1.0_scaffold00079: 3189574-3208993 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.106 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00079: 3198994-3208993 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046600 5273 Angiosperm View MSA
121310632 5274 Embryophyte View MSA
123348066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain