Gene : evm_27.TU.AmTr_v1.0_scaffold00079.69 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23107//PTHR23107:SF3 - SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN Genomic Order:  66
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00079.69 Secondary Identifier:  ? PAC:31564426
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00079.69 0.5kb upstream 0.5kb upstream 15508 true AmTr_v1.0_scaffold00079: 2396655-2412162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00079: 2396655-2397154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 0.5kb downstream 0.5kb downstream 15508 true AmTr_v1.0_scaffold00079: 2397155-2412662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00079: 2412163-2412662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 1.0kb upstream 1.0kb upstream 16008 true AmTr_v1.0_scaffold00079: 2396155-2412162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00079: 2396155-2397154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 1.0kb downstream 1.0kb downstream 16008 true AmTr_v1.0_scaffold00079: 2397155-2413162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00079: 2412163-2413162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 2.0kb upstream 2.0kb upstream 17008 true AmTr_v1.0_scaffold00079: 2395155-2412162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00079: 2395155-2397154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 2.0kb downstream 2.0kb downstream 17008 true AmTr_v1.0_scaffold00079: 2397155-2414162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00079: 2412163-2414162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 5.0kb upstream 5.0kb upstream 20008 true AmTr_v1.0_scaffold00079: 2392155-2412162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00079: 2392155-2397154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 5.0kb downstream 5.0kb downstream 20008 true AmTr_v1.0_scaffold00079: 2397155-2417162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00079: 2412163-2417162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 10.0kb upstream 10.0kb upstream 25008 true AmTr_v1.0_scaffold00079: 2387155-2412162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00079: 2387155-2397154 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 10.0kb downstream 10.0kb downstream 25008 true AmTr_v1.0_scaffold00079: 2397155-2422162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00079.69 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00079: 2412163-2422162 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045386 5273 Angiosperm View MSA
121351391 5274 Embryophyte View MSA
123426567 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain