Gene : evm_27.TU.AmTr_v1.0_scaffold00078.29 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23079:SF1 - PROTEIN RRF-3 Genomic Order:  29
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00078.29 Secondary Identifier:  ? PAC:31555358
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0 Pathways

Genomics

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00078.29 0.5kb upstream 0.5kb upstream 5698 true AmTr_v1.0_scaffold00078: 552044-557741 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00078: 557242-557741 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 0.5kb downstream 0.5kb downstream 5698 true AmTr_v1.0_scaffold00078: 551544-557241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00078: 551544-552043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 1.0kb upstream 1.0kb upstream 6198 true AmTr_v1.0_scaffold00078: 552044-558241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00078: 557242-558241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 1.0kb downstream 1.0kb downstream 6198 true AmTr_v1.0_scaffold00078: 551044-557241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00078: 551044-552043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 2.0kb upstream 2.0kb upstream 7198 true AmTr_v1.0_scaffold00078: 552044-559241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00078: 557242-559241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 2.0kb downstream 2.0kb downstream 7198 true AmTr_v1.0_scaffold00078: 550044-557241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00078: 550044-552043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 5.0kb upstream 5.0kb upstream 10198 true AmTr_v1.0_scaffold00078: 552044-562241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00078: 557242-562241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 5.0kb downstream 5.0kb downstream 10198 true AmTr_v1.0_scaffold00078: 547044-557241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00078: 547044-552043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 10.0kb upstream 10.0kb upstream 15198 true AmTr_v1.0_scaffold00078: 552044-567241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00078: 557242-567241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 10.0kb downstream 10.0kb downstream 15198 true AmTr_v1.0_scaffold00078: 542044-557241 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.29 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00078: 542044-552043 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045596 5273 Angiosperm View MSA
121346387 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain