Gene : evm_27.TU.AmTr_v1.0_scaffold00078.112 A. trichopoda v1.0
Defline:  (1 of 2) PF00005//PF12698 - ABC transporter (ABC_tran) // ABC-2 family transporter protein (ABC2_membrane_3) Genomic Order:  111
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00078.112 Secondary Identifier:  ? PAC:31555336
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00078.112 0.5kb upstream 0.5kb upstream 10404 true AmTr_v1.0_scaffold00078: 1923760-1934163 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00078: 1933664-1934163 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 0.5kb downstream 0.5kb downstream 10404 true AmTr_v1.0_scaffold00078: 1923260-1933663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00078: 1923260-1923759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 1.0kb upstream 1.0kb upstream 10904 true AmTr_v1.0_scaffold00078: 1923760-1934663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00078: 1933664-1934663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 1.0kb downstream 1.0kb downstream 10904 true AmTr_v1.0_scaffold00078: 1922760-1933663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00078: 1922760-1923759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 2.0kb upstream 2.0kb upstream 11904 true AmTr_v1.0_scaffold00078: 1923760-1935663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00078: 1933664-1935663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 2.0kb downstream 2.0kb downstream 11904 true AmTr_v1.0_scaffold00078: 1921760-1933663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00078: 1921760-1923759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 5.0kb upstream 5.0kb upstream 14904 true AmTr_v1.0_scaffold00078: 1923760-1938663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00078: 1933664-1938663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 5.0kb downstream 5.0kb downstream 14904 true AmTr_v1.0_scaffold00078: 1918760-1933663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00078: 1918760-1923759 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 10.0kb upstream 10.0kb upstream 19904 true AmTr_v1.0_scaffold00078: 1923760-1943663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00078: 1933664-1943663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 10.0kb downstream 10.0kb downstream 19904 true AmTr_v1.0_scaffold00078: 1913760-1933663 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00078.112 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00078: 1913760-1923759 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain