Gene : evm_27.TU.AmTr_v1.0_scaffold00088.57 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12937 - VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 Genomic Order:  55
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00088.57 Secondary Identifier:  ? PAC:31575223
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00088.57 0.5kb upstream 0.5kb upstream 2965 true AmTr_v1.0_scaffold00088: 1133375-1136339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00088: 1133375-1133874 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 0.5kb downstream 0.5kb downstream 2965 true AmTr_v1.0_scaffold00088: 1133875-1136839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00088: 1136340-1136839 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 1.0kb upstream 1.0kb upstream 3465 true AmTr_v1.0_scaffold00088: 1132875-1136339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00088: 1132875-1133874 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 1.0kb downstream 1.0kb downstream 3465 true AmTr_v1.0_scaffold00088: 1133875-1137339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00088: 1136340-1137339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 2.0kb upstream 2.0kb upstream 4465 true AmTr_v1.0_scaffold00088: 1131875-1136339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00088: 1131875-1133874 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 2.0kb downstream 2.0kb downstream 4465 true AmTr_v1.0_scaffold00088: 1133875-1138339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00088: 1136340-1138339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 5.0kb upstream 5.0kb upstream 7465 true AmTr_v1.0_scaffold00088: 1128875-1136339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00088: 1128875-1133874 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 5.0kb downstream 5.0kb downstream 7465 true AmTr_v1.0_scaffold00088: 1133875-1141339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00088: 1136340-1141339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 10.0kb upstream 10.0kb upstream 12465 true AmTr_v1.0_scaffold00088: 1123875-1136339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00088: 1123875-1133874 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 10.0kb downstream 10.0kb downstream 12465 true AmTr_v1.0_scaffold00088: 1133875-1146339 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00088.57 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00088: 1136340-1146339 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044389 5273 Angiosperm View MSA
121350792 5274 Embryophyte View MSA
123425897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain