Gene : evm_27.TU.AmTr_v1.0_scaffold00087.5 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00087.5 Secondary Identifier:  ? PAC:31559876
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda POLYAMINSYN3-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-43 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00087.5 0.5kb upstream 0.5kb upstream 10085 true AmTr_v1.0_scaffold00087: 141744-151828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00087: 141744-142243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 0.5kb downstream 0.5kb downstream 10085 true AmTr_v1.0_scaffold00087: 142244-152328 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00087: 151829-152328 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 1.0kb upstream 1.0kb upstream 10585 true AmTr_v1.0_scaffold00087: 141244-151828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00087: 141244-142243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 1.0kb downstream 1.0kb downstream 10585 true AmTr_v1.0_scaffold00087: 142244-152828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00087: 151829-152828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 2.0kb upstream 2.0kb upstream 11585 true AmTr_v1.0_scaffold00087: 140244-151828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00087: 140244-142243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 2.0kb downstream 2.0kb downstream 11585 true AmTr_v1.0_scaffold00087: 142244-153828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00087: 151829-153828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 5.0kb upstream 5.0kb upstream 14585 true AmTr_v1.0_scaffold00087: 137244-151828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00087: 137244-142243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 5.0kb downstream 5.0kb downstream 14585 true AmTr_v1.0_scaffold00087: 142244-156828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00087: 151829-156828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 10.0kb upstream 10.0kb upstream 19585 true AmTr_v1.0_scaffold00087: 132244-151828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00087: 132244-142243 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 10.0kb downstream 10.0kb downstream 19585 true AmTr_v1.0_scaffold00087: 142244-161828 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00087: 151829-161828 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain