Gene : evm_27.TU.AmTr_v1.0_scaffold00086.9 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  9
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.9 Secondary Identifier:  ? PAC:31571545
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7511 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.9 0.5kb upstream 0.5kb upstream 5044 true AmTr_v1.0_scaffold00086: 223226-228269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 227770-228269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 0.5kb downstream 0.5kb downstream 5044 true AmTr_v1.0_scaffold00086: 222726-227769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 222726-223225 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 1.0kb upstream 1.0kb upstream 5544 true AmTr_v1.0_scaffold00086: 223226-228769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 227770-228769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 1.0kb downstream 1.0kb downstream 5544 true AmTr_v1.0_scaffold00086: 222226-227769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 222226-223225 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 2.0kb upstream 2.0kb upstream 6544 true AmTr_v1.0_scaffold00086: 223226-229769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 227770-229769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 2.0kb downstream 2.0kb downstream 6544 true AmTr_v1.0_scaffold00086: 221226-227769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 221226-223225 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 5.0kb upstream 5.0kb upstream 9544 true AmTr_v1.0_scaffold00086: 223226-232769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 227770-232769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 5.0kb downstream 5.0kb downstream 9544 true AmTr_v1.0_scaffold00086: 218226-227769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 218226-223225 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 10.0kb upstream 10.0kb upstream 14544 true AmTr_v1.0_scaffold00086: 223226-237769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 227770-237769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 10.0kb downstream 10.0kb downstream 14544 true AmTr_v1.0_scaffold00086: 213226-227769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.9 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 213226-223225 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain