Gene : evm_27.TU.AmTr_v1.0_scaffold00084.5 A. trichopoda v1.0
Defline:  (1 of 1) PTHR16166//PTHR16166:SF87 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00084.5 Secondary Identifier:  ? PAC:31555194
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00084.5 0.5kb upstream 0.5kb upstream 147071 true AmTr_v1.0_scaffold00084: 281447-428517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00084: 428018-428517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 0.5kb downstream 0.5kb downstream 147071 true AmTr_v1.0_scaffold00084: 280947-428017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00084: 280947-281446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 1.0kb upstream 1.0kb upstream 147571 true AmTr_v1.0_scaffold00084: 281447-429017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00084: 428018-429017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 1.0kb downstream 1.0kb downstream 147571 true AmTr_v1.0_scaffold00084: 280447-428017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00084: 280447-281446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 2.0kb upstream 2.0kb upstream 148571 true AmTr_v1.0_scaffold00084: 281447-430017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00084: 428018-430017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 2.0kb downstream 2.0kb downstream 148571 true AmTr_v1.0_scaffold00084: 279447-428017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00084: 279447-281446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 5.0kb upstream 5.0kb upstream 151571 true AmTr_v1.0_scaffold00084: 281447-433017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00084: 428018-433017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 5.0kb downstream 5.0kb downstream 151571 true AmTr_v1.0_scaffold00084: 276447-428017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00084: 276447-281446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 10.0kb upstream 10.0kb upstream 156571 true AmTr_v1.0_scaffold00084: 281447-438017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00084: 428018-438017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 10.0kb downstream 10.0kb downstream 156571 true AmTr_v1.0_scaffold00084: 271447-428017 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00084: 271447-281446 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042276 5273 Angiosperm View MSA
121346115 5274 Embryophyte View MSA
123424266 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain