Gene : evm_27.TU.AmTr_v1.0_scaffold00099.77 A. trichopoda v1.0
Defline:  (1 of 464) PF01535 - PPR repeat (PPR) Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00099.77 Secondary Identifier:  ? PAC:31570436
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00099.77 0.5kb upstream 0.5kb upstream 2465 true AmTr_v1.0_scaffold00099: 1171178-1173642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00099: 1173143-1173642 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 0.5kb downstream 0.5kb downstream 2465 true AmTr_v1.0_scaffold00099: 1170678-1173142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00099: 1170678-1171177 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 1.0kb upstream 1.0kb upstream 2965 true AmTr_v1.0_scaffold00099: 1171178-1174142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00099: 1173143-1174142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 1.0kb downstream 1.0kb downstream 2965 true AmTr_v1.0_scaffold00099: 1170178-1173142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00099: 1170178-1171177 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 2.0kb upstream 2.0kb upstream 3965 true AmTr_v1.0_scaffold00099: 1171178-1175142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00099: 1173143-1175142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 2.0kb downstream 2.0kb downstream 3965 true AmTr_v1.0_scaffold00099: 1169178-1173142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00099: 1169178-1171177 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 5.0kb upstream 5.0kb upstream 6965 true AmTr_v1.0_scaffold00099: 1171178-1178142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00099: 1173143-1178142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 5.0kb downstream 5.0kb downstream 6965 true AmTr_v1.0_scaffold00099: 1166178-1173142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00099: 1166178-1171177 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 10.0kb upstream 10.0kb upstream 11965 true AmTr_v1.0_scaffold00099: 1171178-1183142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00099: 1173143-1183142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 10.0kb downstream 10.0kb downstream 11965 true AmTr_v1.0_scaffold00099: 1161178-1173142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.77 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00099: 1161178-1171177 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048202 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310882 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain