Gene : evm_27.TU.AmTr_v1.0_scaffold00099.82 A. trichopoda v1.0
Defline:  (1 of 3) PTHR23024//PTHR23024:SF174 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  82
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00099.82 Secondary Identifier:  ? PAC:31570416
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6303 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00099.82 0.5kb upstream 0.5kb upstream 6286 true AmTr_v1.0_scaffold00099: 1231764-1238049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00099: 1237550-1238049 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 0.5kb downstream 0.5kb downstream 6286 true AmTr_v1.0_scaffold00099: 1231264-1237549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00099: 1231264-1231763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 1.0kb upstream 1.0kb upstream 6786 true AmTr_v1.0_scaffold00099: 1231764-1238549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00099: 1237550-1238549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 1.0kb downstream 1.0kb downstream 6786 true AmTr_v1.0_scaffold00099: 1230764-1237549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00099: 1230764-1231763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 2.0kb upstream 2.0kb upstream 7786 true AmTr_v1.0_scaffold00099: 1231764-1239549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00099: 1237550-1239549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 2.0kb downstream 2.0kb downstream 7786 true AmTr_v1.0_scaffold00099: 1229764-1237549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00099: 1229764-1231763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 5.0kb upstream 5.0kb upstream 10786 true AmTr_v1.0_scaffold00099: 1231764-1242549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00099: 1237550-1242549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 5.0kb downstream 5.0kb downstream 10786 true AmTr_v1.0_scaffold00099: 1226764-1237549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00099: 1226764-1231763 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 10.0kb upstream 10.0kb upstream 15786 true AmTr_v1.0_scaffold00099: 1231764-1247549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00099: 1237550-1247549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 10.0kb downstream 10.0kb downstream 15786 true AmTr_v1.0_scaffold00099: 1221764-1237549 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.82 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00099: 1221764-1231763 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043846 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain