Gene : evm_27.TU.AmTr_v1.0_scaffold00102.60 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11995:SF21 - NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT K, CHLOROPLASTIC Genomic Order:  57
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00102.60 Secondary Identifier:  ? PAC:31553989
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-4302 Amborella trichopoda pathologic  
Atrichopoda PWY-5083 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00102.60 0.5kb upstream 0.5kb upstream 1207 true AmTr_v1.0_scaffold00102: 1344970-1346176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00102: 1345677-1346176 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 0.5kb downstream 0.5kb downstream 1207 true AmTr_v1.0_scaffold00102: 1344470-1345676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00102: 1344470-1344969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 1.0kb upstream 1.0kb upstream 1707 true AmTr_v1.0_scaffold00102: 1344970-1346676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00102: 1345677-1346676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 1.0kb downstream 1.0kb downstream 1707 true AmTr_v1.0_scaffold00102: 1343970-1345676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00102: 1343970-1344969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 2.0kb upstream 2.0kb upstream 2707 true AmTr_v1.0_scaffold00102: 1344970-1347676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00102: 1345677-1347676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 2.0kb downstream 2.0kb downstream 2707 true AmTr_v1.0_scaffold00102: 1342970-1345676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00102: 1342970-1344969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 5.0kb upstream 5.0kb upstream 5707 true AmTr_v1.0_scaffold00102: 1344970-1350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00102: 1345677-1350676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 5.0kb downstream 5.0kb downstream 5707 true AmTr_v1.0_scaffold00102: 1339970-1345676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00102: 1339970-1344969 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 10.0kb upstream 10.0kb upstream 10707 true AmTr_v1.0_scaffold00102: 1344970-1355676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00102: 1345677-1355676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 10.0kb downstream 10.0kb downstream 10707 true AmTr_v1.0_scaffold00102: 1334970-1345676 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00102.60 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00102: 1334970-1344969 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain