Gene : evm_27.TU.AmTr_v1.0_scaffold00110.112 A. trichopoda v1.0
Defline:  (1 of 41) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  109
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00110.112 Secondary Identifier:  ? PAC:31552819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00110.112 0.5kb upstream 0.5kb upstream 2321 true AmTr_v1.0_scaffold00110: 1957270-1959590 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00110: 1959091-1959590 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 0.5kb downstream 0.5kb downstream 2321 true AmTr_v1.0_scaffold00110: 1956770-1959090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00110: 1956770-1957269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 1.0kb upstream 1.0kb upstream 2821 true AmTr_v1.0_scaffold00110: 1957270-1960090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00110: 1959091-1960090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 1.0kb downstream 1.0kb downstream 2821 true AmTr_v1.0_scaffold00110: 1956270-1959090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00110: 1956270-1957269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 2.0kb upstream 2.0kb upstream 3821 true AmTr_v1.0_scaffold00110: 1957270-1961090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00110: 1959091-1961090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 2.0kb downstream 2.0kb downstream 3821 true AmTr_v1.0_scaffold00110: 1955270-1959090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00110: 1955270-1957269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 5.0kb upstream 5.0kb upstream 6821 true AmTr_v1.0_scaffold00110: 1957270-1964090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00110: 1959091-1964090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 5.0kb downstream 5.0kb downstream 6821 true AmTr_v1.0_scaffold00110: 1952270-1959090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00110: 1952270-1957269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 10.0kb upstream 10.0kb upstream 11821 true AmTr_v1.0_scaffold00110: 1957270-1969090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00110: 1959091-1969090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 10.0kb downstream 10.0kb downstream 11821 true AmTr_v1.0_scaffold00110: 1947270-1959090 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.112 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00110: 1947270-1957269 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043654 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351271 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain