Gene : evm_27.TU.AmTr_v1.0_scaffold00108.14 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10782:SF34 - E3 SUMO-PROTEIN LIGASE SIZ1 Genomic Order:  14
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00108.14 Secondary Identifier:  ? PAC:31556411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00108.14 0.5kb upstream 0.5kb upstream 47540 true AmTr_v1.0_scaffold00108: 1092037-1139576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00108: 1139077-1139576 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 0.5kb downstream 0.5kb downstream 47540 true AmTr_v1.0_scaffold00108: 1091537-1139076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00108: 1091537-1092036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 1.0kb upstream 1.0kb upstream 48040 true AmTr_v1.0_scaffold00108: 1092037-1140076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00108: 1139077-1140076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 1.0kb downstream 1.0kb downstream 48040 true AmTr_v1.0_scaffold00108: 1091037-1139076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00108: 1091037-1092036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 2.0kb upstream 2.0kb upstream 49040 true AmTr_v1.0_scaffold00108: 1092037-1141076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00108: 1139077-1141076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 2.0kb downstream 2.0kb downstream 49040 true AmTr_v1.0_scaffold00108: 1090037-1139076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00108: 1090037-1092036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 5.0kb upstream 5.0kb upstream 52040 true AmTr_v1.0_scaffold00108: 1092037-1144076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00108: 1139077-1144076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 5.0kb downstream 5.0kb downstream 52040 true AmTr_v1.0_scaffold00108: 1087037-1139076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00108: 1087037-1092036 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 10.0kb upstream 10.0kb upstream 57040 true AmTr_v1.0_scaffold00108: 1092037-1149076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00108: 1139077-1149076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 10.0kb downstream 10.0kb downstream 57040 true AmTr_v1.0_scaffold00108: 1082037-1139076 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00108.14 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00108: 1082037-1092036 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046306 5273 Angiosperm View MSA
121350287 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain