Gene : evm_27.TU.AmTr_v1.0_scaffold00117.8 A. trichopoda v1.0
Defline:  (1 of 3) PTHR11588:SF7 - TUBULIN GAMMA CHAIN Genomic Order:  8
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00117.8 Secondary Identifier:  ? PAC:31555990
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5695 Amborella trichopoda pathologic  
Atrichopoda PWY-6608 Amborella trichopoda pathologic  
Atrichopoda PWY-6609 Amborella trichopoda pathologic  
Atrichopoda PWY-7179 Amborella trichopoda pathologic  
Atrichopoda SALVADEHYPOX-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00117.8 0.5kb upstream 0.5kb upstream 62298 true AmTr_v1.0_scaffold00117: 278392-340689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00117: 278392-278891 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 0.5kb downstream 0.5kb downstream 62298 true AmTr_v1.0_scaffold00117: 278892-341189 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00117: 340690-341189 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 1.0kb upstream 1.0kb upstream 62798 true AmTr_v1.0_scaffold00117: 277892-340689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00117: 277892-278891 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 1.0kb downstream 1.0kb downstream 62798 true AmTr_v1.0_scaffold00117: 278892-341689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00117: 340690-341689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 2.0kb upstream 2.0kb upstream 63798 true AmTr_v1.0_scaffold00117: 276892-340689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00117: 276892-278891 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 2.0kb downstream 2.0kb downstream 63798 true AmTr_v1.0_scaffold00117: 278892-342689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00117: 340690-342689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 5.0kb upstream 5.0kb upstream 66798 true AmTr_v1.0_scaffold00117: 273892-340689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00117: 273892-278891 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 5.0kb downstream 5.0kb downstream 66798 true AmTr_v1.0_scaffold00117: 278892-345689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00117: 340690-345689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 10.0kb upstream 10.0kb upstream 71798 true AmTr_v1.0_scaffold00117: 268892-340689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00117: 268892-278891 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 10.0kb downstream 10.0kb downstream 71798 true AmTr_v1.0_scaffold00117: 278892-350689 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00117.8 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00117: 340690-350689 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain