Gene : evm_27.TU.AmTr_v1.0_scaffold00123.10 A. trichopoda v1.0

Defline:  (1 of 1) PTHR11782:SF3 - APYRASE 7-RELATED Genomic Order:  10
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00123.10 Secondary Identifier:  ? PAC:31558854

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7177 Amborella trichopoda pathologic  
Atrichopoda PWY-7184 Amborella trichopoda pathologic  
Atrichopoda PWY-7185 Amborella trichopoda pathologic  
Atrichopoda PWY-7210 Amborella trichopoda pathologic  
Atrichopoda PWY-7211 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00123.10 0.5kb upstream 0.5kb upstream 14898 true AmTr_v1.0_scaffold00123: 900167-915064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00123: 914565-915064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 0.5kb downstream 0.5kb downstream 14898 true AmTr_v1.0_scaffold00123: 899667-914564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00123: 899667-900166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 1.0kb upstream 1.0kb upstream 15398 true AmTr_v1.0_scaffold00123: 900167-915564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00123: 914565-915564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 1.0kb downstream 1.0kb downstream 15398 true AmTr_v1.0_scaffold00123: 899167-914564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00123: 899167-900166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 2.0kb upstream 2.0kb upstream 16398 true AmTr_v1.0_scaffold00123: 900167-916564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00123: 914565-916564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 2.0kb downstream 2.0kb downstream 16398 true AmTr_v1.0_scaffold00123: 898167-914564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00123: 898167-900166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 5.0kb upstream 5.0kb upstream 19398 true AmTr_v1.0_scaffold00123: 900167-919564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00123: 914565-919564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 5.0kb downstream 5.0kb downstream 19398 true AmTr_v1.0_scaffold00123: 895167-914564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00123: 895167-900166 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 10.0kb upstream 10.0kb upstream 24398 true AmTr_v1.0_scaffold00123: 900167-924564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00123: 914565-924564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 10.0kb downstream 10.0kb downstream 24398 true AmTr_v1.0_scaffold00123: 890167-914564 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00123.10 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00123: 890167-900166 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042120 5273 Angiosperm View MSA
121349143 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain