Gene : evm_27.TU.AmTr_v1.0_scaffold00142.40 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11941:SF47 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  39
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00142.40 Secondary Identifier:  ? PAC:31555670
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7574 Amborella trichopoda pathologic  
Atrichopoda VALDEG-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00142.40 0.5kb upstream 0.5kb upstream 29408 true AmTr_v1.0_scaffold00142: 744744-774151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00142: 773652-774151 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 0.5kb downstream 0.5kb downstream 29408 true AmTr_v1.0_scaffold00142: 744244-773651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00142: 744244-744743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 1.0kb upstream 1.0kb upstream 29908 true AmTr_v1.0_scaffold00142: 744744-774651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00142: 773652-774651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 1.0kb downstream 1.0kb downstream 29908 true AmTr_v1.0_scaffold00142: 743744-773651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00142: 743744-744743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 2.0kb upstream 2.0kb upstream 30908 true AmTr_v1.0_scaffold00142: 744744-775651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00142: 773652-775651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 2.0kb downstream 2.0kb downstream 30908 true AmTr_v1.0_scaffold00142: 742744-773651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00142: 742744-744743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 5.0kb upstream 5.0kb upstream 33908 true AmTr_v1.0_scaffold00142: 744744-778651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00142: 773652-778651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 5.0kb downstream 5.0kb downstream 33908 true AmTr_v1.0_scaffold00142: 739744-773651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00142: 739744-744743 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 10.0kb upstream 10.0kb upstream 38908 true AmTr_v1.0_scaffold00142: 744744-783651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00142: 773652-783651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 10.0kb downstream 10.0kb downstream 38908 true AmTr_v1.0_scaffold00142: 734744-773651 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.40 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00142: 734744-744743 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain