Gene : evm_27.TU.AmTr_v1.0_scaffold00140.38 A. trichopoda v1.0
Defline:  (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00140.38 Secondary Identifier:  ? PAC:31569223
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLNSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3282 Amborella trichopoda pathologic  
Atrichopoda PWY-381 Amborella trichopoda pathologic  
Atrichopoda PWY-6549 Amborella trichopoda pathologic  
Atrichopoda PWY-6963 Amborella trichopoda pathologic  
Atrichopoda PWY-6964 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00140.38 0.5kb upstream 0.5kb upstream 51296 true AmTr_v1.0_scaffold00140: 932502-983797 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00140: 983298-983797 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 0.5kb downstream 0.5kb downstream 51296 true AmTr_v1.0_scaffold00140: 932002-983297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00140: 932002-932501 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 1.0kb upstream 1.0kb upstream 51796 true AmTr_v1.0_scaffold00140: 932502-984297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00140: 983298-984297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 1.0kb downstream 1.0kb downstream 51796 true AmTr_v1.0_scaffold00140: 931502-983297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00140: 931502-932501 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 2.0kb upstream 2.0kb upstream 52796 true AmTr_v1.0_scaffold00140: 932502-985297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00140: 983298-985297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 2.0kb downstream 2.0kb downstream 52796 true AmTr_v1.0_scaffold00140: 930502-983297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00140: 930502-932501 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 5.0kb upstream 5.0kb upstream 55796 true AmTr_v1.0_scaffold00140: 932502-988297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00140: 983298-988297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 5.0kb downstream 5.0kb downstream 55796 true AmTr_v1.0_scaffold00140: 927502-983297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00140: 927502-932501 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 10.0kb upstream 10.0kb upstream 60796 true AmTr_v1.0_scaffold00140: 932502-993297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00140: 983298-993297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 10.0kb downstream 10.0kb downstream 60796 true AmTr_v1.0_scaffold00140: 922502-983297 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00140: 922502-932501 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain