Gene : evm_27.TU.AmTr_v1.0_scaffold00154.28 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00154.28 Secondary Identifier:  ? PAC:31549317
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00154.28 0.5kb upstream 0.5kb upstream 5584 true AmTr_v1.0_scaffold00154: 410423-416006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00154: 410423-410922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 0.5kb downstream 0.5kb downstream 5584 true AmTr_v1.0_scaffold00154: 410923-416506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00154: 416007-416506 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 1.0kb upstream 1.0kb upstream 6084 true AmTr_v1.0_scaffold00154: 409923-416006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00154: 409923-410922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 1.0kb downstream 1.0kb downstream 6084 true AmTr_v1.0_scaffold00154: 410923-417006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00154: 416007-417006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 2.0kb upstream 2.0kb upstream 7084 true AmTr_v1.0_scaffold00154: 408923-416006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00154: 408923-410922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 2.0kb downstream 2.0kb downstream 7084 true AmTr_v1.0_scaffold00154: 410923-418006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00154: 416007-418006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 5.0kb upstream 5.0kb upstream 10084 true AmTr_v1.0_scaffold00154: 405923-416006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00154: 405923-410922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 5.0kb downstream 5.0kb downstream 10084 true AmTr_v1.0_scaffold00154: 410923-421006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00154: 416007-421006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 10.0kb upstream 10.0kb upstream 15084 true AmTr_v1.0_scaffold00154: 400923-416006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00154: 400923-410922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 10.0kb downstream 10.0kb downstream 15084 true AmTr_v1.0_scaffold00154: 410923-426006 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.28 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00154: 416007-426006 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046944 5273 Angiosperm View MSA
121346353 5274 Embryophyte View MSA
123426361 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain