Gene : evm_27.TU.AmTr_v1.0_scaffold00149.42 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00149.42 Secondary Identifier:  ? PAC:31570686
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00149.42 0.5kb upstream 0.5kb upstream 9412 true AmTr_v1.0_scaffold00149: 670762-680173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00149: 670762-671261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 0.5kb downstream 0.5kb downstream 9412 true AmTr_v1.0_scaffold00149: 671262-680673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00149: 680174-680673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 1.0kb upstream 1.0kb upstream 9912 true AmTr_v1.0_scaffold00149: 670262-680173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00149: 670262-671261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 1.0kb downstream 1.0kb downstream 9912 true AmTr_v1.0_scaffold00149: 671262-681173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00149: 680174-681173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 2.0kb upstream 2.0kb upstream 10912 true AmTr_v1.0_scaffold00149: 669262-680173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00149: 669262-671261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 2.0kb downstream 2.0kb downstream 10912 true AmTr_v1.0_scaffold00149: 671262-682173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00149: 680174-682173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 5.0kb upstream 5.0kb upstream 13912 true AmTr_v1.0_scaffold00149: 666262-680173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00149: 666262-671261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 5.0kb downstream 5.0kb downstream 13912 true AmTr_v1.0_scaffold00149: 671262-685173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00149: 680174-685173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 10.0kb upstream 10.0kb upstream 18912 true AmTr_v1.0_scaffold00149: 661262-680173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00149: 661262-671261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 10.0kb downstream 10.0kb downstream 18912 true AmTr_v1.0_scaffold00149: 671262-690173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.42 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00149: 680174-690173 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain