Gene : evm_27.TU.AmTr_v1.0_scaffold00148.38 A. trichopoda v1.0
Defline:  (1 of 3) PF14200 - Ricin-type beta-trefoil lectin domain-like (RicinB_lectin_2) Genomic Order:  38
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00148.38 Secondary Identifier:  ? PAC:31556751
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00148.38 0.5kb upstream 0.5kb upstream 2120 true AmTr_v1.0_scaffold00148: 674518-676637 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00148: 676138-676637 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 0.5kb downstream 0.5kb downstream 2120 true AmTr_v1.0_scaffold00148: 674018-676137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00148: 674018-674517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 1.0kb upstream 1.0kb upstream 2620 true AmTr_v1.0_scaffold00148: 674518-677137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00148: 676138-677137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 1.0kb downstream 1.0kb downstream 2620 true AmTr_v1.0_scaffold00148: 673518-676137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00148: 673518-674517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 2.0kb upstream 2.0kb upstream 3620 true AmTr_v1.0_scaffold00148: 674518-678137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00148: 676138-678137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 2.0kb downstream 2.0kb downstream 3620 true AmTr_v1.0_scaffold00148: 672518-676137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00148: 672518-674517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 5.0kb upstream 5.0kb upstream 6620 true AmTr_v1.0_scaffold00148: 674518-681137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00148: 676138-681137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 5.0kb downstream 5.0kb downstream 6620 true AmTr_v1.0_scaffold00148: 669518-676137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00148: 669518-674517 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 10.0kb upstream 10.0kb upstream 11620 true AmTr_v1.0_scaffold00148: 674518-686137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00148: 676138-686137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 10.0kb downstream 10.0kb downstream 11620 true AmTr_v1.0_scaffold00148: 664518-676137 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00148: 664518-674517 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049376 5273 Angiosperm View MSA
121349071 5274 Embryophyte View MSA
123381151 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain