Gene : evm_27.TU.AmTr_v1.0_scaffold05566.1 A. trichopoda v1.0
Defline:  (1 of 1) PF13963 - Transposase-associated domain (Transpos_assoc) Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold05566.1 Secondary Identifier:  ? PAC:31568979
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold05566.1 0.5kb upstream 0.5kb upstream 735 true AmTr_v1.0_scaffold05566: 1-735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 0.5kb upstream 0.5kb upstream 276 false AmTr_v1.0_scaffold05566: 1-276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 0.5kb downstream 0.5kb downstream 959 true AmTr_v1.0_scaffold05566: 277-1235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold05566: 736-1235 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 1.0kb upstream 1.0kb upstream 735 true AmTr_v1.0_scaffold05566: 1-735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 1.0kb upstream 1.0kb upstream 276 false AmTr_v1.0_scaffold05566: 1-276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 1.0kb downstream 1.0kb downstream 1459 true AmTr_v1.0_scaffold05566: 277-1735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold05566: 736-1735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 2.0kb upstream 2.0kb upstream 735 true AmTr_v1.0_scaffold05566: 1-735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 2.0kb upstream 2.0kb upstream 276 false AmTr_v1.0_scaffold05566: 1-276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 2.0kb downstream 2.0kb downstream 1765 true AmTr_v1.0_scaffold05566: 277-2041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 2.0kb downstream 2.0kb downstream 1306 false AmTr_v1.0_scaffold05566: 736-2041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 5.0kb upstream 5.0kb upstream 735 true AmTr_v1.0_scaffold05566: 1-735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 5.0kb upstream 5.0kb upstream 276 false AmTr_v1.0_scaffold05566: 1-276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 5.0kb downstream 5.0kb downstream 1765 true AmTr_v1.0_scaffold05566: 277-2041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 5.0kb downstream 5.0kb downstream 1306 false AmTr_v1.0_scaffold05566: 736-2041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 10.0kb upstream 10.0kb upstream 735 true AmTr_v1.0_scaffold05566: 1-735 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 10.0kb upstream 10.0kb upstream 276 false AmTr_v1.0_scaffold05566: 1-276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 10.0kb downstream 10.0kb downstream 1765 true AmTr_v1.0_scaffold05566: 277-2041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold05566.1 10.0kb downstream 10.0kb downstream 1306 false AmTr_v1.0_scaffold05566: 736-2041 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain