Gene : evm_27.TU.AmTr_v1.0_scaffold00310.1 A. trichopoda v1.0

Defline:  (1 of 5) PF08214 - Histone acetylation protein (HAT_KAT11) Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00310.1 Secondary Identifier:  ? PAC:31569501

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00310.1 0.5kb upstream 0.5kb upstream 4091 true AmTr_v1.0_scaffold00310: 2084-6174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00310: 2084-2583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 0.5kb downstream 0.5kb downstream 4091 true AmTr_v1.0_scaffold00310: 2584-6674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00310: 6175-6674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 1.0kb upstream 1.0kb upstream 4591 true AmTr_v1.0_scaffold00310: 1584-6174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00310: 1584-2583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 1.0kb downstream 1.0kb downstream 4591 true AmTr_v1.0_scaffold00310: 2584-7174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00310: 6175-7174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 2.0kb upstream 2.0kb upstream 5591 true AmTr_v1.0_scaffold00310: 584-6174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00310: 584-2583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 2.0kb downstream 2.0kb downstream 5591 true AmTr_v1.0_scaffold00310: 2584-8174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00310: 6175-8174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 5.0kb upstream 5.0kb upstream 6174 true AmTr_v1.0_scaffold00310: 1-6174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 5.0kb upstream 5.0kb upstream 2583 false AmTr_v1.0_scaffold00310: 1-2583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 5.0kb downstream 5.0kb downstream 8591 true AmTr_v1.0_scaffold00310: 2584-11174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00310: 6175-11174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 10.0kb upstream 10.0kb upstream 6174 true AmTr_v1.0_scaffold00310: 1-6174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 10.0kb upstream 10.0kb upstream 2583 false AmTr_v1.0_scaffold00310: 1-2583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 10.0kb downstream 10.0kb downstream 13591 true AmTr_v1.0_scaffold00310: 2584-16174 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00310.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00310: 6175-16174 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049603 5273 Angiosperm View MSA
121311498 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain