Gene : evm_27.TU.AmTr_v1.0_scaffold00168.19 A. trichopoda v1.0
Defline:  (1 of 1) 1.2.4.2 - Oxoglutarate dehydrogenase (succinyl-transferring) / Oxoglutarate dehydrogenase (lipoamide) Genomic Order:  19
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00168.19 Secondary Identifier:  ? PAC:31560623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5084 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00168.19 0.5kb upstream 0.5kb upstream 13711 true AmTr_v1.0_scaffold00168: 536934-550644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00168: 536934-537433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 0.5kb downstream 0.5kb downstream 13711 true AmTr_v1.0_scaffold00168: 537434-551144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00168: 550645-551144 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 1.0kb upstream 1.0kb upstream 14211 true AmTr_v1.0_scaffold00168: 536434-550644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00168: 536434-537433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 1.0kb downstream 1.0kb downstream 14211 true AmTr_v1.0_scaffold00168: 537434-551644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00168: 550645-551644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 2.0kb upstream 2.0kb upstream 15211 true AmTr_v1.0_scaffold00168: 535434-550644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00168: 535434-537433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 2.0kb downstream 2.0kb downstream 15211 true AmTr_v1.0_scaffold00168: 537434-552644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00168: 550645-552644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 5.0kb upstream 5.0kb upstream 18211 true AmTr_v1.0_scaffold00168: 532434-550644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00168: 532434-537433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 5.0kb downstream 5.0kb downstream 18211 true AmTr_v1.0_scaffold00168: 537434-555644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00168: 550645-555644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 10.0kb upstream 10.0kb upstream 23211 true AmTr_v1.0_scaffold00168: 527434-550644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00168: 527434-537433 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 10.0kb downstream 10.0kb downstream 23211 true AmTr_v1.0_scaffold00168: 537434-560644 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00168.19 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00168: 550645-560644 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain