Gene : evm_27.TU.AmTr_v1.0_scaffold00155.30 A. trichopoda v1.0
Defline:  (1 of 1) 6.2.1.26 - o-succinylbenzoate--CoA ligase / OSB-CoA synthetase Genomic Order:  30
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00155.30 Secondary Identifier:  ? PAC:31564298
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5837 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00155.30 0.5kb upstream 0.5kb upstream 9984 true AmTr_v1.0_scaffold00155: 560853-570836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00155: 560853-561352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 0.5kb downstream 0.5kb downstream 9984 true AmTr_v1.0_scaffold00155: 561353-571336 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00155: 570837-571336 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 1.0kb upstream 1.0kb upstream 10484 true AmTr_v1.0_scaffold00155: 560353-570836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00155: 560353-561352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 1.0kb downstream 1.0kb downstream 10484 true AmTr_v1.0_scaffold00155: 561353-571836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00155: 570837-571836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 2.0kb upstream 2.0kb upstream 11484 true AmTr_v1.0_scaffold00155: 559353-570836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00155: 559353-561352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 2.0kb downstream 2.0kb downstream 11484 true AmTr_v1.0_scaffold00155: 561353-572836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00155: 570837-572836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 5.0kb upstream 5.0kb upstream 14484 true AmTr_v1.0_scaffold00155: 556353-570836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00155: 556353-561352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 5.0kb downstream 5.0kb downstream 14484 true AmTr_v1.0_scaffold00155: 561353-575836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00155: 570837-575836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 10.0kb upstream 10.0kb upstream 19484 true AmTr_v1.0_scaffold00155: 551353-570836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00155: 551353-561352 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 10.0kb downstream 10.0kb downstream 19484 true AmTr_v1.0_scaffold00155: 561353-580836 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00155.30 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00155: 570837-580836 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042580 5273 Angiosperm View MSA
121346156 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain