Gene : evm_27.TU.AmTr_v1.0_scaffold00170.18 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  18
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00170.18 Secondary Identifier:  ? PAC:31553841
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5173 Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PYRUVDEHYD-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00170.18 0.5kb upstream 0.5kb upstream 17653 true AmTr_v1.0_scaffold00170: 340822-358474 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00170: 357975-358474 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 0.5kb downstream 0.5kb downstream 17653 true AmTr_v1.0_scaffold00170: 340322-357974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00170: 340322-340821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 1.0kb upstream 1.0kb upstream 18153 true AmTr_v1.0_scaffold00170: 340822-358974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00170: 357975-358974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 1.0kb downstream 1.0kb downstream 18153 true AmTr_v1.0_scaffold00170: 339822-357974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00170: 339822-340821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 2.0kb upstream 2.0kb upstream 19153 true AmTr_v1.0_scaffold00170: 340822-359974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00170: 357975-359974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 2.0kb downstream 2.0kb downstream 19153 true AmTr_v1.0_scaffold00170: 338822-357974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00170: 338822-340821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 5.0kb upstream 5.0kb upstream 22153 true AmTr_v1.0_scaffold00170: 340822-362974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00170: 357975-362974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 5.0kb downstream 5.0kb downstream 22153 true AmTr_v1.0_scaffold00170: 335822-357974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00170: 335822-340821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 10.0kb upstream 10.0kb upstream 27153 true AmTr_v1.0_scaffold00170: 340822-367974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00170: 357975-367974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 10.0kb downstream 10.0kb downstream 27153 true AmTr_v1.0_scaffold00170: 330822-357974 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00170.18 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00170: 330822-340821 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain