Gene : Brast01G317400 B. stacei v1.1
Defline:  (1 of 4) 6.1.1.11 - Serine--tRNA ligase / Seryl-tRNA synthetase Genomic Order:  3174
Name:  ? Brast01G317400 Secondary Identifier:  ? PAC:32881231
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei TRNA-CHARGING-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast01G317400 0.5kb upstream 0.5kb upstream 8534 true Chr01: 23732653-23741186 Brachypodium stacei
Brast01G317400 0.5kb upstream 0.5kb upstream 500 false Chr01: 23740687-23741186 Brachypodium stacei
Brast01G317400 0.5kb downstream 0.5kb downstream 8534 true Chr01: 23732153-23740686 Brachypodium stacei
Brast01G317400 0.5kb downstream 0.5kb downstream 500 false Chr01: 23732153-23732652 Brachypodium stacei
Brast01G317400 1.0kb upstream 1.0kb upstream 9034 true Chr01: 23732653-23741686 Brachypodium stacei
Brast01G317400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 23740687-23741686 Brachypodium stacei
Brast01G317400 1.0kb downstream 1.0kb downstream 9034 true Chr01: 23731653-23740686 Brachypodium stacei
Brast01G317400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 23731653-23732652 Brachypodium stacei
Brast01G317400 2.0kb upstream 2.0kb upstream 10034 true Chr01: 23732653-23742686 Brachypodium stacei
Brast01G317400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 23740687-23742686 Brachypodium stacei
Brast01G317400 2.0kb downstream 2.0kb downstream 10034 true Chr01: 23730653-23740686 Brachypodium stacei
Brast01G317400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 23730653-23732652 Brachypodium stacei
Brast01G317400 5.0kb upstream 5.0kb upstream 13034 true Chr01: 23732653-23745686 Brachypodium stacei
Brast01G317400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 23740687-23745686 Brachypodium stacei
Brast01G317400 5.0kb downstream 5.0kb downstream 13034 true Chr01: 23727653-23740686 Brachypodium stacei
Brast01G317400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 23727653-23732652 Brachypodium stacei
Brast01G317400 10.0kb upstream 10.0kb upstream 18034 true Chr01: 23732653-23750686 Brachypodium stacei
Brast01G317400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 23740687-23750686 Brachypodium stacei
Brast01G317400 10.0kb downstream 10.0kb downstream 18034 true Chr01: 23722653-23740686 Brachypodium stacei
Brast01G317400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 23722653-23732652 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589180 5269 Grass View MSA
122041756 5273 Angiosperm View MSA
121347508 5274 Embryophyte View MSA
123423893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain