Gene : Brast02G154500 B. stacei v1.1
Defline:  (1 of 2) 6.2.1.2 - Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  1545
Name:  ? Brast02G154500 Secondary Identifier:  ? PAC:32877369
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-1121 Brachypodium stacei pathologic  
Bstacei PWY-321 Brachypodium stacei pathologic  
Bstacei PWY-5136 Brachypodium stacei pathologic  
Bstacei PWY-5143 Brachypodium stacei pathologic  
Bstacei PWY-5147 Brachypodium stacei pathologic  
Bstacei PWY-5156 Brachypodium stacei pathologic  
Bstacei PWY-561 Brachypodium stacei pathologic  
Bstacei PWY-5885 Brachypodium stacei pathologic  
Bstacei PWY-5971 Brachypodium stacei pathologic  
Bstacei PWY-5989 Brachypodium stacei pathologic  
Bstacei PWY66-21 Brachypodium stacei pathologic  
Bstacei PWY-6733 Brachypodium stacei pathologic  
Bstacei PWY-6803 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast02G154500 0.5kb upstream 0.5kb upstream 5314 true Chr02: 9691993-9697306 Brachypodium stacei
Brast02G154500 0.5kb upstream 0.5kb upstream 500 false Chr02: 9696807-9697306 Brachypodium stacei
Brast02G154500 0.5kb downstream 0.5kb downstream 5314 true Chr02: 9691493-9696806 Brachypodium stacei
Brast02G154500 0.5kb downstream 0.5kb downstream 500 false Chr02: 9691493-9691992 Brachypodium stacei
Brast02G154500 1.0kb upstream 1.0kb upstream 5814 true Chr02: 9691993-9697806 Brachypodium stacei
Brast02G154500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9696807-9697806 Brachypodium stacei
Brast02G154500 1.0kb downstream 1.0kb downstream 5814 true Chr02: 9690993-9696806 Brachypodium stacei
Brast02G154500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9690993-9691992 Brachypodium stacei
Brast02G154500 2.0kb upstream 2.0kb upstream 6814 true Chr02: 9691993-9698806 Brachypodium stacei
Brast02G154500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9696807-9698806 Brachypodium stacei
Brast02G154500 2.0kb downstream 2.0kb downstream 6814 true Chr02: 9689993-9696806 Brachypodium stacei
Brast02G154500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9689993-9691992 Brachypodium stacei
Brast02G154500 5.0kb upstream 5.0kb upstream 9814 true Chr02: 9691993-9701806 Brachypodium stacei
Brast02G154500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9696807-9701806 Brachypodium stacei
Brast02G154500 5.0kb downstream 5.0kb downstream 9814 true Chr02: 9686993-9696806 Brachypodium stacei
Brast02G154500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9686993-9691992 Brachypodium stacei
Brast02G154500 10.0kb upstream 10.0kb upstream 14814 true Chr02: 9691993-9706806 Brachypodium stacei
Brast02G154500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9696807-9706806 Brachypodium stacei
Brast02G154500 10.0kb downstream 10.0kb downstream 14814 true Chr02: 9681993-9696806 Brachypodium stacei
Brast02G154500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9681993-9691992 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577556 5269 Grass View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain