Gene : Brast03G252500 B. stacei v1.1
Defline:  (1 of 2) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase Genomic Order:  2525
Name:  ? Brast03G252500 Secondary Identifier:  ? PAC:32858967
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G252500 0.5kb upstream 0.5kb upstream 4513 true Chr03: 21921499-21926011 Brachypodium stacei
Brast03G252500 0.5kb upstream 0.5kb upstream 500 false Chr03: 21925512-21926011 Brachypodium stacei
Brast03G252500 0.5kb downstream 0.5kb downstream 4513 true Chr03: 21920999-21925511 Brachypodium stacei
Brast03G252500 0.5kb downstream 0.5kb downstream 500 false Chr03: 21920999-21921498 Brachypodium stacei
Brast03G252500 1.0kb upstream 1.0kb upstream 5013 true Chr03: 21921499-21926511 Brachypodium stacei
Brast03G252500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21925512-21926511 Brachypodium stacei
Brast03G252500 1.0kb downstream 1.0kb downstream 5013 true Chr03: 21920499-21925511 Brachypodium stacei
Brast03G252500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21920499-21921498 Brachypodium stacei
Brast03G252500 2.0kb upstream 2.0kb upstream 6013 true Chr03: 21921499-21927511 Brachypodium stacei
Brast03G252500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21925512-21927511 Brachypodium stacei
Brast03G252500 2.0kb downstream 2.0kb downstream 6013 true Chr03: 21919499-21925511 Brachypodium stacei
Brast03G252500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21919499-21921498 Brachypodium stacei
Brast03G252500 5.0kb upstream 5.0kb upstream 9013 true Chr03: 21921499-21930511 Brachypodium stacei
Brast03G252500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21925512-21930511 Brachypodium stacei
Brast03G252500 5.0kb downstream 5.0kb downstream 9013 true Chr03: 21916499-21925511 Brachypodium stacei
Brast03G252500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21916499-21921498 Brachypodium stacei
Brast03G252500 10.0kb upstream 10.0kb upstream 14013 true Chr03: 21921499-21935511 Brachypodium stacei
Brast03G252500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21925512-21935511 Brachypodium stacei
Brast03G252500 10.0kb downstream 10.0kb downstream 14013 true Chr03: 21911499-21925511 Brachypodium stacei
Brast03G252500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21911499-21921498 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577156 5269 Grass View MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain