Gene : Brast03G239200 B. stacei v1.1
Defline:  (1 of 1) PTHR21145//PTHR21145:SF2 - CHORISMATE MUTASE Genomic Order:  2392
Name:  ? Brast03G239200 Secondary Identifier:  ? PAC:32855684
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-3462 Brachypodium stacei pathologic  
Bstacei PWY-6120 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G239200 0.5kb upstream 0.5kb upstream 3733 true Chr03: 21016531-21020263 Brachypodium stacei
Brast03G239200 0.5kb upstream 0.5kb upstream 500 false Chr03: 21019764-21020263 Brachypodium stacei
Brast03G239200 0.5kb downstream 0.5kb downstream 3733 true Chr03: 21016031-21019763 Brachypodium stacei
Brast03G239200 0.5kb downstream 0.5kb downstream 500 false Chr03: 21016031-21016530 Brachypodium stacei
Brast03G239200 1.0kb upstream 1.0kb upstream 4233 true Chr03: 21016531-21020763 Brachypodium stacei
Brast03G239200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21019764-21020763 Brachypodium stacei
Brast03G239200 1.0kb downstream 1.0kb downstream 4233 true Chr03: 21015531-21019763 Brachypodium stacei
Brast03G239200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21015531-21016530 Brachypodium stacei
Brast03G239200 2.0kb upstream 2.0kb upstream 5233 true Chr03: 21016531-21021763 Brachypodium stacei
Brast03G239200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21019764-21021763 Brachypodium stacei
Brast03G239200 2.0kb downstream 2.0kb downstream 5233 true Chr03: 21014531-21019763 Brachypodium stacei
Brast03G239200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21014531-21016530 Brachypodium stacei
Brast03G239200 5.0kb upstream 5.0kb upstream 8233 true Chr03: 21016531-21024763 Brachypodium stacei
Brast03G239200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21019764-21024763 Brachypodium stacei
Brast03G239200 5.0kb downstream 5.0kb downstream 8233 true Chr03: 21011531-21019763 Brachypodium stacei
Brast03G239200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21011531-21016530 Brachypodium stacei
Brast03G239200 10.0kb upstream 10.0kb upstream 13233 true Chr03: 21016531-21029763 Brachypodium stacei
Brast03G239200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21019764-21029763 Brachypodium stacei
Brast03G239200 10.0kb downstream 10.0kb downstream 13233 true Chr03: 21006531-21019763 Brachypodium stacei
Brast03G239200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21006531-21016530 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580660 5269 Grass View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain