Gene : Brast03G043900 B. stacei v1.1
Defline:  (1 of 3) PTHR10836//PTHR10836:SF58 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  439
Name:  ? Brast03G043900 Secondary Identifier:  ? PAC:32858816
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei ANAEROFRUCAT-PWY Brachypodium stacei pathologic  
Bstacei ANAGLYCOLYSIS-PWY Brachypodium stacei pathologic  
Bstacei GLUCONEO-PWY Brachypodium stacei pathologic  
Bstacei PWY-1042 Brachypodium stacei pathologic  
Bstacei PWY-5464 Brachypodium stacei pathologic  
Bstacei SUCSYN-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G043900 0.5kb upstream 0.5kb upstream 4423 true Chr03: 2637306-2641728 Brachypodium stacei
Brast03G043900 0.5kb upstream 0.5kb upstream 500 false Chr03: 2641229-2641728 Brachypodium stacei
Brast03G043900 0.5kb downstream 0.5kb downstream 4423 true Chr03: 2636806-2641228 Brachypodium stacei
Brast03G043900 0.5kb downstream 0.5kb downstream 500 false Chr03: 2636806-2637305 Brachypodium stacei
Brast03G043900 1.0kb upstream 1.0kb upstream 4923 true Chr03: 2637306-2642228 Brachypodium stacei
Brast03G043900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2641229-2642228 Brachypodium stacei
Brast03G043900 1.0kb downstream 1.0kb downstream 4923 true Chr03: 2636306-2641228 Brachypodium stacei
Brast03G043900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2636306-2637305 Brachypodium stacei
Brast03G043900 2.0kb upstream 2.0kb upstream 5923 true Chr03: 2637306-2643228 Brachypodium stacei
Brast03G043900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2641229-2643228 Brachypodium stacei
Brast03G043900 2.0kb downstream 2.0kb downstream 5923 true Chr03: 2635306-2641228 Brachypodium stacei
Brast03G043900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2635306-2637305 Brachypodium stacei
Brast03G043900 5.0kb upstream 5.0kb upstream 8923 true Chr03: 2637306-2646228 Brachypodium stacei
Brast03G043900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2641229-2646228 Brachypodium stacei
Brast03G043900 5.0kb downstream 5.0kb downstream 8923 true Chr03: 2632306-2641228 Brachypodium stacei
Brast03G043900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2632306-2637305 Brachypodium stacei
Brast03G043900 10.0kb upstream 10.0kb upstream 13923 true Chr03: 2637306-2651228 Brachypodium stacei
Brast03G043900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2641229-2651228 Brachypodium stacei
Brast03G043900 10.0kb downstream 10.0kb downstream 13923 true Chr03: 2627306-2641228 Brachypodium stacei
Brast03G043900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2627306-2637305 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589376 5269 Grass View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain