Gene : Brast03G173700 B. stacei v1.1
Defline:  (1 of 2) PTHR12358//PTHR12358:SF39 - SPHINGOSINE KINASE Genomic Order:  1737
Name:  ? Brast03G173700 Secondary Identifier:  ? PAC:32857807
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-5129 Brachypodium stacei pathologic  
Bstacei PWY-6483 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast03G173700 0.5kb upstream 0.5kb upstream 8920 true Chr03: 16365390-16374309 Brachypodium stacei
Brast03G173700 0.5kb upstream 0.5kb upstream 500 false Chr03: 16365390-16365889 Brachypodium stacei
Brast03G173700 0.5kb downstream 0.5kb downstream 8920 true Chr03: 16365890-16374809 Brachypodium stacei
Brast03G173700 0.5kb downstream 0.5kb downstream 500 false Chr03: 16374310-16374809 Brachypodium stacei
Brast03G173700 1.0kb upstream 1.0kb upstream 9420 true Chr03: 16364890-16374309 Brachypodium stacei
Brast03G173700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16364890-16365889 Brachypodium stacei
Brast03G173700 1.0kb downstream 1.0kb downstream 9420 true Chr03: 16365890-16375309 Brachypodium stacei
Brast03G173700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16374310-16375309 Brachypodium stacei
Brast03G173700 2.0kb upstream 2.0kb upstream 10420 true Chr03: 16363890-16374309 Brachypodium stacei
Brast03G173700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16363890-16365889 Brachypodium stacei
Brast03G173700 2.0kb downstream 2.0kb downstream 10420 true Chr03: 16365890-16376309 Brachypodium stacei
Brast03G173700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16374310-16376309 Brachypodium stacei
Brast03G173700 5.0kb upstream 5.0kb upstream 13420 true Chr03: 16360890-16374309 Brachypodium stacei
Brast03G173700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16360890-16365889 Brachypodium stacei
Brast03G173700 5.0kb downstream 5.0kb downstream 13420 true Chr03: 16365890-16379309 Brachypodium stacei
Brast03G173700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16374310-16379309 Brachypodium stacei
Brast03G173700 10.0kb upstream 10.0kb upstream 18420 true Chr03: 16355890-16374309 Brachypodium stacei
Brast03G173700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16355890-16365889 Brachypodium stacei
Brast03G173700 10.0kb downstream 10.0kb downstream 18420 true Chr03: 16365890-16384309 Brachypodium stacei
Brast03G173700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16374310-16384309 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577757 5269 Grass View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain