Gene : Brast04G145000 B. stacei v1.1
Defline:  (1 of 4) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  1450
Name:  ? Brast04G145000 Secondary Identifier:  ? PAC:32865776
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G145000 0.5kb upstream 0.5kb upstream 8146 true Chr04: 9439234-9447379 Brachypodium stacei
Brast04G145000 0.5kb upstream 0.5kb upstream 500 false Chr04: 9446880-9447379 Brachypodium stacei
Brast04G145000 0.5kb downstream 0.5kb downstream 8146 true Chr04: 9438734-9446879 Brachypodium stacei
Brast04G145000 0.5kb downstream 0.5kb downstream 500 false Chr04: 9438734-9439233 Brachypodium stacei
Brast04G145000 1.0kb upstream 1.0kb upstream 8646 true Chr04: 9439234-9447879 Brachypodium stacei
Brast04G145000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9446880-9447879 Brachypodium stacei
Brast04G145000 1.0kb downstream 1.0kb downstream 8646 true Chr04: 9438234-9446879 Brachypodium stacei
Brast04G145000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9438234-9439233 Brachypodium stacei
Brast04G145000 2.0kb upstream 2.0kb upstream 9646 true Chr04: 9439234-9448879 Brachypodium stacei
Brast04G145000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9446880-9448879 Brachypodium stacei
Brast04G145000 2.0kb downstream 2.0kb downstream 9646 true Chr04: 9437234-9446879 Brachypodium stacei
Brast04G145000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9437234-9439233 Brachypodium stacei
Brast04G145000 5.0kb upstream 5.0kb upstream 12646 true Chr04: 9439234-9451879 Brachypodium stacei
Brast04G145000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9446880-9451879 Brachypodium stacei
Brast04G145000 5.0kb downstream 5.0kb downstream 12646 true Chr04: 9434234-9446879 Brachypodium stacei
Brast04G145000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9434234-9439233 Brachypodium stacei
Brast04G145000 10.0kb upstream 10.0kb upstream 17646 true Chr04: 9439234-9456879 Brachypodium stacei
Brast04G145000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9446880-9456879 Brachypodium stacei
Brast04G145000 10.0kb downstream 10.0kb downstream 17646 true Chr04: 9429234-9446879 Brachypodium stacei
Brast04G145000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9429234-9439233 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545617 5269 Grass View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain