Gene : Brast04G190100 B. stacei v1.1
Defline:  (1 of 1) 3.5.4.26//5.4.99.28 - tRNA pseudouridine(32) synthase / Pseudouridine synthase RluA Genomic Order:  1901
Name:  ? Brast04G190100 Secondary Identifier:  ? PAC:32864627
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei RIBOSYN2-PWY Brachypodium stacei pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G190100 0.5kb upstream 0.5kb upstream 9943 true Chr04: 12865003-12874945 Brachypodium stacei
Brast04G190100 0.5kb upstream 0.5kb upstream 500 false Chr04: 12874446-12874945 Brachypodium stacei
Brast04G190100 0.5kb downstream 0.5kb downstream 9943 true Chr04: 12864503-12874445 Brachypodium stacei
Brast04G190100 0.5kb downstream 0.5kb downstream 500 false Chr04: 12864503-12865002 Brachypodium stacei
Brast04G190100 1.0kb upstream 1.0kb upstream 10443 true Chr04: 12865003-12875445 Brachypodium stacei
Brast04G190100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12874446-12875445 Brachypodium stacei
Brast04G190100 1.0kb downstream 1.0kb downstream 10443 true Chr04: 12864003-12874445 Brachypodium stacei
Brast04G190100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12864003-12865002 Brachypodium stacei
Brast04G190100 2.0kb upstream 2.0kb upstream 11443 true Chr04: 12865003-12876445 Brachypodium stacei
Brast04G190100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12874446-12876445 Brachypodium stacei
Brast04G190100 2.0kb downstream 2.0kb downstream 11443 true Chr04: 12863003-12874445 Brachypodium stacei
Brast04G190100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12863003-12865002 Brachypodium stacei
Brast04G190100 5.0kb upstream 5.0kb upstream 14443 true Chr04: 12865003-12879445 Brachypodium stacei
Brast04G190100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12874446-12879445 Brachypodium stacei
Brast04G190100 5.0kb downstream 5.0kb downstream 14443 true Chr04: 12860003-12874445 Brachypodium stacei
Brast04G190100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12860003-12865002 Brachypodium stacei
Brast04G190100 10.0kb upstream 10.0kb upstream 19443 true Chr04: 12865003-12884445 Brachypodium stacei
Brast04G190100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12874446-12884445 Brachypodium stacei
Brast04G190100 10.0kb downstream 10.0kb downstream 19443 true Chr04: 12855003-12874445 Brachypodium stacei
Brast04G190100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12855003-12865002 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570511 5269 Grass View MSA
122047695 5273 Angiosperm View MSA
121349064 5274 Embryophyte View MSA
123426945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain