Gene : Brast04G308800 B. stacei v1.1
Defline:  (1 of 10) KOG0978 - E3 ubiquitin ligase involved in syntaxin degradation Genomic Order:  3088
Name:  ? Brast04G308800 Secondary Identifier:  ? PAC:32864764
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G308800 0.5kb upstream 0.5kb upstream 12429 true Chr04: 22748548-22760976 Brachypodium stacei
Brast04G308800 0.5kb upstream 0.5kb upstream 500 false Chr04: 22748548-22749047 Brachypodium stacei
Brast04G308800 0.5kb downstream 0.5kb downstream 12429 true Chr04: 22749048-22761476 Brachypodium stacei
Brast04G308800 0.5kb downstream 0.5kb downstream 500 false Chr04: 22760977-22761476 Brachypodium stacei
Brast04G308800 1.0kb upstream 1.0kb upstream 12929 true Chr04: 22748048-22760976 Brachypodium stacei
Brast04G308800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 22748048-22749047 Brachypodium stacei
Brast04G308800 1.0kb downstream 1.0kb downstream 12929 true Chr04: 22749048-22761976 Brachypodium stacei
Brast04G308800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 22760977-22761976 Brachypodium stacei
Brast04G308800 2.0kb upstream 2.0kb upstream 13929 true Chr04: 22747048-22760976 Brachypodium stacei
Brast04G308800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 22747048-22749047 Brachypodium stacei
Brast04G308800 2.0kb downstream 2.0kb downstream 13929 true Chr04: 22749048-22762976 Brachypodium stacei
Brast04G308800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 22760977-22762976 Brachypodium stacei
Brast04G308800 5.0kb upstream 5.0kb upstream 16929 true Chr04: 22744048-22760976 Brachypodium stacei
Brast04G308800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 22744048-22749047 Brachypodium stacei
Brast04G308800 5.0kb downstream 5.0kb downstream 16929 true Chr04: 22749048-22765976 Brachypodium stacei
Brast04G308800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 22760977-22765976 Brachypodium stacei
Brast04G308800 10.0kb upstream 10.0kb upstream 21929 true Chr04: 22739048-22760976 Brachypodium stacei
Brast04G308800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 22739048-22749047 Brachypodium stacei
Brast04G308800 10.0kb downstream 10.0kb downstream 21929 true Chr04: 22749048-22770976 Brachypodium stacei
Brast04G308800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 22760977-22770976 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582435 5269 Grass View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain