Gene : Brast04G116300 B. stacei v1.1
Defline:  (1 of 4) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  1163
Name:  ? Brast04G116300 Secondary Identifier:  ? PAC:32863612
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PHOTOALL-PWY Brachypodium stacei pathologic  
Bstacei PWY-101 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast04G116300 0.5kb upstream 0.5kb upstream 3598 true Chr04: 7433757-7437354 Brachypodium stacei
Brast04G116300 0.5kb upstream 0.5kb upstream 500 false Chr04: 7436855-7437354 Brachypodium stacei
Brast04G116300 0.5kb downstream 0.5kb downstream 3598 true Chr04: 7433257-7436854 Brachypodium stacei
Brast04G116300 0.5kb downstream 0.5kb downstream 500 false Chr04: 7433257-7433756 Brachypodium stacei
Brast04G116300 1.0kb upstream 1.0kb upstream 4098 true Chr04: 7433757-7437854 Brachypodium stacei
Brast04G116300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7436855-7437854 Brachypodium stacei
Brast04G116300 1.0kb downstream 1.0kb downstream 4098 true Chr04: 7432757-7436854 Brachypodium stacei
Brast04G116300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7432757-7433756 Brachypodium stacei
Brast04G116300 2.0kb upstream 2.0kb upstream 5098 true Chr04: 7433757-7438854 Brachypodium stacei
Brast04G116300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7436855-7438854 Brachypodium stacei
Brast04G116300 2.0kb downstream 2.0kb downstream 5098 true Chr04: 7431757-7436854 Brachypodium stacei
Brast04G116300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7431757-7433756 Brachypodium stacei
Brast04G116300 5.0kb upstream 5.0kb upstream 8098 true Chr04: 7433757-7441854 Brachypodium stacei
Brast04G116300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7436855-7441854 Brachypodium stacei
Brast04G116300 5.0kb downstream 5.0kb downstream 8098 true Chr04: 7428757-7436854 Brachypodium stacei
Brast04G116300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7428757-7433756 Brachypodium stacei
Brast04G116300 10.0kb upstream 10.0kb upstream 13098 true Chr04: 7433757-7446854 Brachypodium stacei
Brast04G116300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7436855-7446854 Brachypodium stacei
Brast04G116300 10.0kb downstream 10.0kb downstream 13098 true Chr04: 7423757-7436854 Brachypodium stacei
Brast04G116300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7423757-7433756 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586576 5269 Grass View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain