Gene : Brast05G016100 B. stacei v1.1
Defline:  (1 of 2) PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Genomic Order:  161
Name:  ? Brast05G016100 Secondary Identifier:  ? PAC:32868186
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast05G016100 0.5kb upstream 0.5kb upstream 11159 true Chr05: 943854-955012 Brachypodium stacei
Brast05G016100 0.5kb upstream 0.5kb upstream 500 false Chr05: 954513-955012 Brachypodium stacei
Brast05G016100 0.5kb downstream 0.5kb downstream 11159 true Chr05: 943354-954512 Brachypodium stacei
Brast05G016100 0.5kb downstream 0.5kb downstream 500 false Chr05: 943354-943853 Brachypodium stacei
Brast05G016100 1.0kb upstream 1.0kb upstream 11659 true Chr05: 943854-955512 Brachypodium stacei
Brast05G016100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 954513-955512 Brachypodium stacei
Brast05G016100 1.0kb downstream 1.0kb downstream 11659 true Chr05: 942854-954512 Brachypodium stacei
Brast05G016100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 942854-943853 Brachypodium stacei
Brast05G016100 2.0kb upstream 2.0kb upstream 12659 true Chr05: 943854-956512 Brachypodium stacei
Brast05G016100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 954513-956512 Brachypodium stacei
Brast05G016100 2.0kb downstream 2.0kb downstream 12659 true Chr05: 941854-954512 Brachypodium stacei
Brast05G016100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 941854-943853 Brachypodium stacei
Brast05G016100 5.0kb upstream 5.0kb upstream 15659 true Chr05: 943854-959512 Brachypodium stacei
Brast05G016100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 954513-959512 Brachypodium stacei
Brast05G016100 5.0kb downstream 5.0kb downstream 15659 true Chr05: 938854-954512 Brachypodium stacei
Brast05G016100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 938854-943853 Brachypodium stacei
Brast05G016100 10.0kb upstream 10.0kb upstream 20659 true Chr05: 943854-964512 Brachypodium stacei
Brast05G016100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 954513-964512 Brachypodium stacei
Brast05G016100 10.0kb downstream 10.0kb downstream 20659 true Chr05: 933854-954512 Brachypodium stacei
Brast05G016100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 933854-943853 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570502 5269 Grass View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain