Gene : Brast05G134600 B. stacei v1.1
Defline:  (1 of 1) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  1346
Name:  ? Brast05G134600 Secondary Identifier:  ? PAC:32866914
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast05G134600 0.5kb upstream 0.5kb upstream 4708 true Chr05: 12788235-12792942 Brachypodium stacei
Brast05G134600 0.5kb upstream 0.5kb upstream 500 false Chr05: 12792443-12792942 Brachypodium stacei
Brast05G134600 0.5kb downstream 0.5kb downstream 4708 true Chr05: 12787735-12792442 Brachypodium stacei
Brast05G134600 0.5kb downstream 0.5kb downstream 500 false Chr05: 12787735-12788234 Brachypodium stacei
Brast05G134600 1.0kb upstream 1.0kb upstream 5208 true Chr05: 12788235-12793442 Brachypodium stacei
Brast05G134600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 12792443-12793442 Brachypodium stacei
Brast05G134600 1.0kb downstream 1.0kb downstream 5208 true Chr05: 12787235-12792442 Brachypodium stacei
Brast05G134600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 12787235-12788234 Brachypodium stacei
Brast05G134600 2.0kb upstream 2.0kb upstream 6208 true Chr05: 12788235-12794442 Brachypodium stacei
Brast05G134600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 12792443-12794442 Brachypodium stacei
Brast05G134600 2.0kb downstream 2.0kb downstream 6208 true Chr05: 12786235-12792442 Brachypodium stacei
Brast05G134600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 12786235-12788234 Brachypodium stacei
Brast05G134600 5.0kb upstream 5.0kb upstream 9208 true Chr05: 12788235-12797442 Brachypodium stacei
Brast05G134600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 12792443-12797442 Brachypodium stacei
Brast05G134600 5.0kb downstream 5.0kb downstream 9208 true Chr05: 12783235-12792442 Brachypodium stacei
Brast05G134600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 12783235-12788234 Brachypodium stacei
Brast05G134600 10.0kb upstream 10.0kb upstream 14208 true Chr05: 12788235-12802442 Brachypodium stacei
Brast05G134600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 12792443-12802442 Brachypodium stacei
Brast05G134600 10.0kb downstream 10.0kb downstream 14208 true Chr05: 12778235-12792442 Brachypodium stacei
Brast05G134600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 12778235-12788234 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
124571949 5269 Grass View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain