Gene : Brast07G040100 B. stacei v1.1
Defline:  (1 of 1) PTHR12526:SF337 - STARCH SYNTHASE 2, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  401
Name:  ? Brast07G040100 Secondary Identifier:  ? PAC:32872702
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei GLYCOGENSYNTH-PWY Brachypodium stacei pathologic  
Bstacei PWY-622 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast07G040100 0.5kb upstream 0.5kb upstream 7636 true Chr07: 2282101-2289736 Brachypodium stacei
Brast07G040100 0.5kb upstream 0.5kb upstream 500 false Chr07: 2282101-2282600 Brachypodium stacei
Brast07G040100 0.5kb downstream 0.5kb downstream 7636 true Chr07: 2282601-2290236 Brachypodium stacei
Brast07G040100 0.5kb downstream 0.5kb downstream 500 false Chr07: 2289737-2290236 Brachypodium stacei
Brast07G040100 1.0kb upstream 1.0kb upstream 8136 true Chr07: 2281601-2289736 Brachypodium stacei
Brast07G040100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 2281601-2282600 Brachypodium stacei
Brast07G040100 1.0kb downstream 1.0kb downstream 8136 true Chr07: 2282601-2290736 Brachypodium stacei
Brast07G040100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 2289737-2290736 Brachypodium stacei
Brast07G040100 2.0kb upstream 2.0kb upstream 9136 true Chr07: 2280601-2289736 Brachypodium stacei
Brast07G040100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 2280601-2282600 Brachypodium stacei
Brast07G040100 2.0kb downstream 2.0kb downstream 9136 true Chr07: 2282601-2291736 Brachypodium stacei
Brast07G040100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 2289737-2291736 Brachypodium stacei
Brast07G040100 5.0kb upstream 5.0kb upstream 12136 true Chr07: 2277601-2289736 Brachypodium stacei
Brast07G040100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 2277601-2282600 Brachypodium stacei
Brast07G040100 5.0kb downstream 5.0kb downstream 12136 true Chr07: 2282601-2294736 Brachypodium stacei
Brast07G040100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 2289737-2294736 Brachypodium stacei
Brast07G040100 10.0kb upstream 10.0kb upstream 17136 true Chr07: 2272601-2289736 Brachypodium stacei
Brast07G040100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 2272601-2282600 Brachypodium stacei
Brast07G040100 10.0kb downstream 10.0kb downstream 17136 true Chr07: 2282601-2299736 Brachypodium stacei
Brast07G040100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 2289737-2299736 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573118 5269 Grass View MSA
122042634 5273 Angiosperm View MSA
121343835 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain