Gene : Brast08G243500 B. stacei v1.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF141 - METALLOPROTEASE Genomic Order:  2435
Name:  ? Brast08G243500 Secondary Identifier:  ? PAC:32860998
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-3781 Brachypodium stacei pathologic  
Bstacei PWY-7279 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G243500 0.5kb upstream 0.5kb upstream 4070 true Chr08: 20356777-20360846 Brachypodium stacei
Brast08G243500 0.5kb upstream 0.5kb upstream 500 false Chr08: 20360347-20360846 Brachypodium stacei
Brast08G243500 0.5kb downstream 0.5kb downstream 4070 true Chr08: 20356277-20360346 Brachypodium stacei
Brast08G243500 0.5kb downstream 0.5kb downstream 500 false Chr08: 20356277-20356776 Brachypodium stacei
Brast08G243500 1.0kb upstream 1.0kb upstream 4570 true Chr08: 20356777-20361346 Brachypodium stacei
Brast08G243500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 20360347-20361346 Brachypodium stacei
Brast08G243500 1.0kb downstream 1.0kb downstream 4570 true Chr08: 20355777-20360346 Brachypodium stacei
Brast08G243500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 20355777-20356776 Brachypodium stacei
Brast08G243500 2.0kb upstream 2.0kb upstream 5570 true Chr08: 20356777-20362346 Brachypodium stacei
Brast08G243500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 20360347-20362346 Brachypodium stacei
Brast08G243500 2.0kb downstream 2.0kb downstream 5570 true Chr08: 20354777-20360346 Brachypodium stacei
Brast08G243500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 20354777-20356776 Brachypodium stacei
Brast08G243500 5.0kb upstream 5.0kb upstream 8570 true Chr08: 20356777-20365346 Brachypodium stacei
Brast08G243500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 20360347-20365346 Brachypodium stacei
Brast08G243500 5.0kb downstream 5.0kb downstream 8570 true Chr08: 20351777-20360346 Brachypodium stacei
Brast08G243500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 20351777-20356776 Brachypodium stacei
Brast08G243500 10.0kb upstream 10.0kb upstream 13570 true Chr08: 20356777-20370346 Brachypodium stacei
Brast08G243500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 20360347-20370346 Brachypodium stacei
Brast08G243500 10.0kb downstream 10.0kb downstream 13570 true Chr08: 20346777-20360346 Brachypodium stacei
Brast08G243500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 20346777-20356776 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577730 5269 Grass View MSA
122050410 5273 Angiosperm View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain