Gene : Brast08G227800 B. stacei v1.1
Defline:  (1 of 1) PTHR11254//PTHR11254:SF327 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  2278
Name:  ? Brast08G227800 Secondary Identifier:  ? PAC:32861711
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-7511 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G227800 0.5kb upstream 0.5kb upstream 6655 true Chr08: 19459487-19466141 Brachypodium stacei
Brast08G227800 0.5kb upstream 0.5kb upstream 500 false Chr08: 19459487-19459986 Brachypodium stacei
Brast08G227800 0.5kb downstream 0.5kb downstream 6655 true Chr08: 19459987-19466641 Brachypodium stacei
Brast08G227800 0.5kb downstream 0.5kb downstream 500 false Chr08: 19466142-19466641 Brachypodium stacei
Brast08G227800 1.0kb upstream 1.0kb upstream 7155 true Chr08: 19458987-19466141 Brachypodium stacei
Brast08G227800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 19458987-19459986 Brachypodium stacei
Brast08G227800 1.0kb downstream 1.0kb downstream 7155 true Chr08: 19459987-19467141 Brachypodium stacei
Brast08G227800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 19466142-19467141 Brachypodium stacei
Brast08G227800 2.0kb upstream 2.0kb upstream 8155 true Chr08: 19457987-19466141 Brachypodium stacei
Brast08G227800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 19457987-19459986 Brachypodium stacei
Brast08G227800 2.0kb downstream 2.0kb downstream 8155 true Chr08: 19459987-19468141 Brachypodium stacei
Brast08G227800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 19466142-19468141 Brachypodium stacei
Brast08G227800 5.0kb upstream 5.0kb upstream 11155 true Chr08: 19454987-19466141 Brachypodium stacei
Brast08G227800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 19454987-19459986 Brachypodium stacei
Brast08G227800 5.0kb downstream 5.0kb downstream 11155 true Chr08: 19459987-19471141 Brachypodium stacei
Brast08G227800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 19466142-19471141 Brachypodium stacei
Brast08G227800 10.0kb upstream 10.0kb upstream 16155 true Chr08: 19449987-19466141 Brachypodium stacei
Brast08G227800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 19449987-19459986 Brachypodium stacei
Brast08G227800 10.0kb downstream 10.0kb downstream 16155 true Chr08: 19459987-19476141 Brachypodium stacei
Brast08G227800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 19466142-19476141 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574381 5269 Grass View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain